Top 10 Best Secondary Schools In Uganda 2025/2026
Uganda is home to many top secondary schools that excel not only academically but also in sports and culture. These institutions shape well-rounded individuals, equipping them with the knowledge, skills, and values needed for global success. With excellent academic programs, skilled educators, and a variety of extracurricular activities, Uganda’s secondary schools attract students from across East Africa. In this article, we will explore what makes these schools exceptional.
1. St. Mary’s Secondary School
St. Mary’s Secondary School is widely recognized as one of the best boarding schools in Uganda. Situated in Kampala, this government-registered institution boasts excellent infrastructure that helps unlock the intellectual potential of its students. As one of Uganda’s top performers, St. Mary’s offers a perfect blend of academic excellence and quality facilities.
2. Makerere College School
Makerere College School ranks as one of Uganda’s leading secondary schools, known for its strong academic reputation. It is a government-aided mixed boarding school with solid infrastructure, modern learning equipment, and a dedicated staff. Makerere College continues to produce disciplined, academically strong students who excel in both O and A-levels.
3. St. Henry’s College Kitovu
St. Henry’s College Kitovu, established in 1922, is one of Uganda’s best all-boys secondary schools. The government-aided school emphasizes discipline and academic excellence, offering a supportive environment for boys to grow into well-rounded individuals. St. Henry’s remains one of the best-performing boys’ schools in Uganda.
4. Uganda Martyrs Secondary School Namugongo
Uganda Martyrs Secondary School Namugongo is not only beautiful but also one of the top-ranking schools in Uganda. The school sits on a large expanse of land, with impressive infrastructure dedicated to academic success. Founded to honor Ugandan martyrs, it offers a peaceful yet challenging learning environment, making it one of Uganda’s best O and A-level schools.
5. St. Mary’s College Namagunga
St. Mary’s College Namagunga is a prestigious all-girls boarding school located in Kyaggwe County, Mukono District. The school provides a well-equipped, safe learning environment with a focus on academic rigor and empowering young girls. St. Mary’s is among the best schools for girls in Uganda, offering a solid foundation for their academic and personal growth.
6. Seeta High School
Seeta High School, a mixed boarding school, is known for its academic excellence. The school operates dual campuses and fosters an environment conducive to both learning and personal development. With its commitment to high standards, Seeta High also encourages students to embrace good moral values, making it an outstanding choice for secondary education.
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7. Ndejje Senior Secondary School
Ndejje Senior Secondary School is one of Uganda’s best-performing government-aided schools. Known for its commitment to discipline and academic excellence, Ndejje provides a solid educational foundation. Students graduate equipped with the necessary skills to thrive in their future careers, making it a top choice for secondary education in Uganda.
8. Ntare School
Ntare School is Uganda’s premier all-boys secondary school, renowned for its high academic standards and exceptional teaching staff. The school’s serene environment allows boys to focus on their studies while excelling in A and O-levels. Ntare remains one of the top high schools for boys in Uganda and consistently produces top performers.
9. Nabisunsa Girls Secondary School
Nabisunsa Girls Secondary School, founded in 1954 by Prince Bardu Kakungulu, has built a reputation as one of Uganda’s top-performing girls’ schools. Located in Kampala, Nabisunsa provides an environment where girls can thrive academically and personally. The school continues to excel in producing well-rounded students who contribute to society.
10. Namilyango College School
Founded in 1902, Namilyango College School is one of Uganda’s oldest and most prestigious boys’ schools. Located in Mukono District, Namilyango excels in academics and sports. The school’s long-standing tradition of excellence makes it a leading choice for students who want to achieve success in multiple fields.